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DNAMAN使用手册(An Integrated System for Sequence Analysis )
作者:Stephen Little… 来源:生物秀 时间:2007-5-15

    Sequence Search
    Search for nucleotide sequences
    Search for consensus sequences
    Search for open reading frames
    Search for repeat sequences
    Search for amino acid sequences

    Search for nucleotide sequences
    With DNAMAN, you can search for nucleotide sequences from one or both strands of a DNA sequence. Gaps and ambiguous nucleotides are allowed in the query sequences. You may search for a list of query sequences on the target sequence.


    DNAMAN instantly reports the searching results in graphics. Colors and arrowheads indicate different sequence groups and sites. You may magnify any region of the DNA fragment and display the regional sequence of by selection.


    Search for consensus sequences
    With DNAMAN, you can search for DNA or protein consensus sequences from both strands or six reading frames of DNA sequences. DNAMAN provides a database of DNA and protein consensus sequences. The database is expandable and editable. You can create custom consensus sequence databases.

    Search for open reading frames
    You may search for open reading frames from six reading frames of a DNA sequence. The searching results are shown in a text table. DNAMAN also provides a graphical view of the location of Start/Stop codons on a DNA sequence.

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